A bioinformatics e-book for beginners. training handbook. updated 1 day ago by Biostar 2.8k • written 7.5 years ago by Istvan Albert 101k.
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Aug 1, 2012 · Hi There,. I am trying to find genes that express different isoforms in cancer vs normal RNA-seq data. The first thing that came to my mind was ...
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Mar 10, 2016 · Hi,. My question may seem so simple. Could you tell me what is the difference between aligning and mapping the short reads to the reference ...
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May 30, 2012 · Tools capable of detecting fusion genes: Most of these use RNA-seq data, some use WGS data, and some use both.
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Dec 9, 2017 · The main benefit of hisat2 is that is uses fewer resources than STAR and that it can better handler known SNPs if you make the aligner aware ...
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Jan 9, 2013 · Personally, I use Tophat to map RNA-seq reads and BWA to map genomic DNA-derived reads (from ChIPseq). Does this answer your question? ADD ...
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Nov 13, 2016 · So my question is, Are there pre-made STAR index files for the mm10 genome that I could download? And if so where and how? Thanks in advance for ...
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People also ask
What format is the star index file?
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Apr 4, 2011 · Invent a new weakly defined, internally redundant, ambiguous, bulky fruit salad of a data format. Again.
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